Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6dO55057 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6dO55057 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6dO55057 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6dO55057 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.55■□□□□ 0.24
Pde6dO55057 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pde6dO55057 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6dO55057 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pde6dO55057 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6dO55057 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6dO55057 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pde6dO55057 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6dO55057 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Pde6dO55057 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6dO55057 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6dO55057 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.54■□□□□ 0.24
Pde6dO55057 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pde6dO55057 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6dO55057 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6dO55057 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6dO55057 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6dO55057 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6dO55057 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6dO55057 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6dO55057 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6dO55057 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6dO55057 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.53■□□□□ 0.24
Pde6dO55057 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Pde6dO55057 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6dO55057 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.52■□□□□ 0.24
Pde6dO55057 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.52■□□□□ 0.24
Pde6dO55057 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.52■□□□□ 0.24
Pde6dO55057 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6dO55057 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pde6dO55057 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Pde6dO55057 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pde6dO55057 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Pde6dO55057 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.51■□□□□ 0.23
Pde6dO55057 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.51■□□□□ 0.23
Pde6dO55057 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pde6dO55057 Nkain2-201ENSMUST00000092602 558 ntBASIC16.51■□□□□ 0.23
Pde6dO55057 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6dO55057 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6dO55057 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6dO55057 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6dO55057 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6dO55057 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pde6dO55057 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6dO55057 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6dO55057 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.5■□□□□ 0.23
Pde6dO55057 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Pde6dO55057 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6dO55057 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.5■□□□□ 0.23
Pde6dO55057 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6dO55057 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.5■□□□□ 0.23
Pde6dO55057 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6dO55057 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pde6dO55057 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6dO55057 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.5■□□□□ 0.23
Pde6dO55057 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pde6dO55057 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6dO55057 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.49■□□□□ 0.23
Pde6dO55057 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6dO55057 Gm45855-201ENSMUST00000212546 880 ntBASIC16.49■□□□□ 0.23
Pde6dO55057 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6dO55057 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pde6dO55057 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6dO55057 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6dO55057 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6dO55057 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6dO55057 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6dO55057 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.48■□□□□ 0.23
Pde6dO55057 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6dO55057 Iqck-206ENSMUST00000208658 2891 ntBASIC16.48■□□□□ 0.23
Pde6dO55057 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pde6dO55057 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pde6dO55057 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Pde6dO55057 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.47■□□□□ 0.23
Pde6dO55057 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6dO55057 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6dO55057 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6dO55057 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6dO55057 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6dO55057 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
Pde6dO55057 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pde6dO55057 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Pde6dO55057 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6dO55057 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6dO55057 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6dO55057 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6dO55057 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pde6dO55057 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.46■□□□□ 0.23
Pde6dO55057 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.46■□□□□ 0.23
Pde6dO55057 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6dO55057 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.46■□□□□ 0.23
Pde6dO55057 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6dO55057 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pde6dO55057 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pde6dO55057 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6dO55057 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms