Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Phox2bO35690 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Phox2bO35690 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.12■□□□□ 0.97
Phox2bO35690 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.11■□□□□ 0.97
Phox2bO35690 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Phox2bO35690 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Phox2bO35690 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Phox2bO35690 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Phox2bO35690 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Phox2bO35690 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Phox2bO35690 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Phox2bO35690 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Phox2bO35690 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Phox2bO35690 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.1■□□□□ 0.97
Phox2bO35690 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Phox2bO35690 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Phox2bO35690 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.1■□□□□ 0.97
Phox2bO35690 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Phox2bO35690 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
Phox2bO35690 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Phox2bO35690 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Phox2bO35690 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Phox2bO35690 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Phox2bO35690 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Phox2bO35690 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.09■□□□□ 0.97
Phox2bO35690 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.09■□□□□ 0.97
Phox2bO35690 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Phox2bO35690 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Phox2bO35690 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Phox2bO35690 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Phox2bO35690 Gm10849-201ENSMUST00000100397 618 ntBASIC21.08■□□□□ 0.97
Phox2bO35690 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Phox2bO35690 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.08■□□□□ 0.97
Phox2bO35690 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.08■□□□□ 0.97
Phox2bO35690 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.08■□□□□ 0.97
Phox2bO35690 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Phox2bO35690 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Phox2bO35690 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Phox2bO35690 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Phox2bO35690 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Phox2bO35690 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.07■□□□□ 0.96
Phox2bO35690 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Phox2bO35690 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.07■□□□□ 0.96
Phox2bO35690 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Phox2bO35690 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Phox2bO35690 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Phox2bO35690 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Phox2bO35690 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Phox2bO35690 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.06■□□□□ 0.96
Phox2bO35690 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Phox2bO35690 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Phox2bO35690 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Phox2bO35690 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Phox2bO35690 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.06■□□□□ 0.96
Phox2bO35690 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.06■□□□□ 0.96
Phox2bO35690 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.06■□□□□ 0.96
Phox2bO35690 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.06■□□□□ 0.96
Phox2bO35690 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Phox2bO35690 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Phox2bO35690 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Phox2bO35690 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.05■□□□□ 0.96
Phox2bO35690 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Phox2bO35690 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.05■□□□□ 0.96
Phox2bO35690 Spcs1-204ENSMUST00000226782 949 ntBASIC21.05■□□□□ 0.96
Phox2bO35690 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Phox2bO35690 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.05■□□□□ 0.96
Phox2bO35690 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.05■□□□□ 0.96
Phox2bO35690 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Phox2bO35690 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Phox2bO35690 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Phox2bO35690 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Phox2bO35690 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Phox2bO35690 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Phox2bO35690 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Phox2bO35690 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Phox2bO35690 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Phox2bO35690 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Phox2bO35690 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Phox2bO35690 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.03■□□□□ 0.96
Phox2bO35690 Gm22325-201ENSMUST00000158904 308 ntBASIC21.03■□□□□ 0.96
Phox2bO35690 Gm8493-201ENSMUST00000196881 489 ntBASIC21.03■□□□□ 0.96
Phox2bO35690 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Phox2bO35690 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Phox2bO35690 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Phox2bO35690 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Phox2bO35690 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Phox2bO35690 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Phox2bO35690 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Phox2bO35690 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Phox2bO35690 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Phox2bO35690 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Phox2bO35690 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Phox2bO35690 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Phox2bO35690 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Phox2bO35690 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Phox2bO35690 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.01■□□□□ 0.95
Phox2bO35690 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Phox2bO35690 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Phox2bO35690 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.01■□□□□ 0.95
Phox2bO35690 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms