Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1O35604 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1O35604 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1O35604 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1O35604 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1O35604 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1O35604 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1O35604 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1O35604 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1O35604 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.49■□□□□ 0.87
Npc1O35604 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Npc1O35604 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Npc1O35604 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1O35604 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Npc1O35604 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1O35604 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.48■□□□□ 0.87
Npc1O35604 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1O35604 Gm9959-201ENSMUST00000068277 390 ntBASIC20.48■□□□□ 0.87
Npc1O35604 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1O35604 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1O35604 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1O35604 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1O35604 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1O35604 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.48■□□□□ 0.87
Npc1O35604 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npc1O35604 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Npc1O35604 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npc1O35604 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Npc1O35604 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.47■□□□□ 0.87
Npc1O35604 Gm10399-202ENSMUST00000202768 748 ntBASIC20.47■□□□□ 0.87
Npc1O35604 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.47■□□□□ 0.87
Npc1O35604 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npc1O35604 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Npc1O35604 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1O35604 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1O35604 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1O35604 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1O35604 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.46■□□□□ 0.87
Npc1O35604 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1O35604 Etf1-202ENSMUST00000180351 108 ntBASIC20.46■□□□□ 0.87
Npc1O35604 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.46■□□□□ 0.87
Npc1O35604 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.46■□□□□ 0.87
Npc1O35604 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.46■□□□□ 0.87
Npc1O35604 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1O35604 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1O35604 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1O35604 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1O35604 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1O35604 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1O35604 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1O35604 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Npc1O35604 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Npc1O35604 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.45■□□□□ 0.86
Npc1O35604 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.44■□□□□ 0.86
Npc1O35604 Gm14117-201ENSMUST00000122417 843 ntBASIC20.44■□□□□ 0.86
Npc1O35604 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1O35604 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1O35604 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1O35604 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1O35604 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1O35604 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1O35604 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Npc1O35604 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.43■□□□□ 0.86
Npc1O35604 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1O35604 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1O35604 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.42■□□□□ 0.86
Npc1O35604 Gm40881-201ENSMUST00000223397 166 ntBASIC20.42■□□□□ 0.86
Npc1O35604 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1O35604 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1O35604 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1O35604 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1O35604 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1O35604 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1O35604 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1O35604 Gm7417-201ENSMUST00000192950 473 ntBASIC20.41■□□□□ 0.86
Npc1O35604 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.41■□□□□ 0.86
Npc1O35604 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.41■□□□□ 0.86
Npc1O35604 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.41■□□□□ 0.86
Npc1O35604 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Npc1O35604 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1O35604 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1O35604 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1O35604 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1O35604 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1O35604 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.4■□□□□ 0.86
Npc1O35604 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.4■□□□□ 0.86
Npc1O35604 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.4■□□□□ 0.86
Npc1O35604 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1O35604 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1O35604 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1O35604 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1O35604 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1O35604 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1O35604 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1O35604 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Npc1O35604 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Npc1O35604 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
Npc1O35604 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1O35604 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1O35604 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms