Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clk4O35493 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clk4O35493 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clk4O35493 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clk4O35493 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clk4O35493 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.1■□□□□ 0.81
Clk4O35493 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clk4O35493 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.1■□□□□ 0.81
Clk4O35493 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clk4O35493 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clk4O35493 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.09■□□□□ 0.81
Clk4O35493 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clk4O35493 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clk4O35493 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clk4O35493 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clk4O35493 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.09■□□□□ 0.81
Clk4O35493 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clk4O35493 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clk4O35493 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clk4O35493 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.08■□□□□ 0.81
Clk4O35493 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Clk4O35493 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clk4O35493 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
Clk4O35493 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Clk4O35493 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clk4O35493 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clk4O35493 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clk4O35493 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clk4O35493 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clk4O35493 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clk4O35493 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Clk4O35493 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clk4O35493 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clk4O35493 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clk4O35493 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clk4O35493 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.07■□□□□ 0.8
Clk4O35493 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clk4O35493 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clk4O35493 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.06■□□□□ 0.8
Clk4O35493 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clk4O35493 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Clk4O35493 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clk4O35493 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Clk4O35493 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Clk4O35493 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.06■□□□□ 0.8
Clk4O35493 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clk4O35493 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk4O35493 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk4O35493 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk4O35493 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
Clk4O35493 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk4O35493 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clk4O35493 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk4O35493 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk4O35493 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk4O35493 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clk4O35493 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clk4O35493 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clk4O35493 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.04■□□□□ 0.8
Clk4O35493 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clk4O35493 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.04■□□□□ 0.8
Clk4O35493 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.04■□□□□ 0.8
Clk4O35493 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clk4O35493 Gm10232-201ENSMUST00000089221 720 ntBASIC20.04■□□□□ 0.8
Clk4O35493 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clk4O35493 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clk4O35493 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Clk4O35493 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clk4O35493 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clk4O35493 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clk4O35493 Gm15546-201ENSMUST00000122095 826 ntBASIC20.03■□□□□ 0.8
Clk4O35493 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.03■□□□□ 0.8
Clk4O35493 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clk4O35493 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Clk4O35493 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Clk4O35493 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.02■□□□□ 0.8
Clk4O35493 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.02■□□□□ 0.8
Clk4O35493 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Clk4O35493 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clk4O35493 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clk4O35493 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clk4O35493 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clk4O35493 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Clk4O35493 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clk4O35493 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Clk4O35493 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clk4O35493 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clk4O35493 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clk4O35493 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clk4O35493 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk4O35493 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Clk4O35493 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk4O35493 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk4O35493 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Clk4O35493 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Clk4O35493 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk4O35493 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk4O35493 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk4O35493 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk4O35493 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms