Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Alx4O35137 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Alx4O35137 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx4O35137 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx4O35137 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Alx4O35137 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx4O35137 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx4O35137 Gm9806-201ENSMUST00000051080 552 ntBASIC18.75■□□□□ 0.59
Alx4O35137 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx4O35137 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Alx4O35137 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Alx4O35137 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx4O35137 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.74■□□□□ 0.59
Alx4O35137 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Alx4O35137 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.74■□□□□ 0.59
Alx4O35137 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Alx4O35137 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx4O35137 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx4O35137 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Alx4O35137 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx4O35137 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx4O35137 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Alx4O35137 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx4O35137 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx4O35137 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx4O35137 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx4O35137 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Alx4O35137 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx4O35137 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx4O35137 Scarna2-201ENSMUST00000157560 414 ntBASIC18.72■□□□□ 0.59
Alx4O35137 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx4O35137 Gm16437-201ENSMUST00000025669 507 ntBASIC18.72■□□□□ 0.59
Alx4O35137 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx4O35137 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx4O35137 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx4O35137 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx4O35137 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx4O35137 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx4O35137 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Alx4O35137 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx4O35137 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Alx4O35137 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Alx4O35137 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx4O35137 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Alx4O35137 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx4O35137 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx4O35137 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.7■□□□□ 0.58
Alx4O35137 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.7■□□□□ 0.58
Alx4O35137 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx4O35137 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx4O35137 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.7■□□□□ 0.58
Alx4O35137 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Alx4O35137 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx4O35137 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Alx4O35137 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx4O35137 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx4O35137 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Alx4O35137 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx4O35137 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.69■□□□□ 0.58
Alx4O35137 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx4O35137 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Alx4O35137 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Alx4O35137 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Alx4O35137 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx4O35137 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
Alx4O35137 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx4O35137 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx4O35137 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx4O35137 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.68■□□□□ 0.58
Alx4O35137 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx4O35137 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Alx4O35137 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx4O35137 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx4O35137 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Alx4O35137 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx4O35137 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Alx4O35137 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx4O35137 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx4O35137 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx4O35137 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx4O35137 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Alx4O35137 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx4O35137 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Alx4O35137 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alx4O35137 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alx4O35137 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Alx4O35137 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx4O35137 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx4O35137 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alx4O35137 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.65■□□□□ 0.58
Alx4O35137 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Alx4O35137 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Alx4O35137 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx4O35137 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alx4O35137 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Alx4O35137 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx4O35137 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alx4O35137 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Alx4O35137 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Alx4O35137 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms