Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ercc2O08811 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ercc2O08811 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ercc2O08811 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ercc2O08811 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ercc2O08811 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ercc2O08811 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ercc2O08811 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.61■■□□□ 1.05
Ercc2O08811 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Ercc2O08811 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.6■■□□□ 1.05
Ercc2O08811 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ercc2O08811 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ercc2O08811 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ercc2O08811 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.6■■□□□ 1.05
Ercc2O08811 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ercc2O08811 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.59■■□□□ 1.05
Ercc2O08811 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ercc2O08811 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ercc2O08811 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.59■■□□□ 1.05
Ercc2O08811 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ercc2O08811 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ercc2O08811 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ercc2O08811 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ercc2O08811 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.58■■□□□ 1.05
Ercc2O08811 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ercc2O08811 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ercc2O08811 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Ercc2O08811 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ercc2O08811 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ercc2O08811 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ercc2O08811 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ercc2O08811 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ercc2O08811 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ercc2O08811 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ercc2O08811 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ercc2O08811 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ercc2O08811 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Ercc2O08811 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ercc2O08811 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ercc2O08811 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ercc2O08811 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Ercc2O08811 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ercc2O08811 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ercc2O08811 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ercc2O08811 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ercc2O08811 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ercc2O08811 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ercc2O08811 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.56■■□□□ 1.04
Ercc2O08811 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ercc2O08811 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ercc2O08811 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ercc2O08811 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ercc2O08811 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
Ercc2O08811 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ercc2O08811 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ercc2O08811 Gm10232-201ENSMUST00000089221 720 ntBASIC21.54■■□□□ 1.04
Ercc2O08811 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ercc2O08811 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ercc2O08811 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ercc2O08811 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ercc2O08811 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ercc2O08811 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ercc2O08811 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ercc2O08811 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ercc2O08811 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ercc2O08811 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ercc2O08811 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.52■■□□□ 1.04
Ercc2O08811 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ercc2O08811 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ercc2O08811 Gm5812-201ENSMUST00000061073 957 ntBASIC21.52■■□□□ 1.04
Ercc2O08811 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ercc2O08811 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ercc2O08811 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ercc2O08811 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ercc2O08811 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ercc2O08811 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ercc2O08811 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ercc2O08811 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ercc2O08811 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ercc2O08811 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.5■■□□□ 1.03
Ercc2O08811 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ercc2O08811 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.5■■□□□ 1.03
Ercc2O08811 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.5■■□□□ 1.03
Ercc2O08811 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ercc2O08811 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ercc2O08811 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ercc2O08811 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ercc2O08811 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ercc2O08811 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.48■■□□□ 1.03
Ercc2O08811 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.48■■□□□ 1.03
Ercc2O08811 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ercc2O08811 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ercc2O08811 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ercc2O08811 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.48■■□□□ 1.03
Ercc2O08811 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.48■■□□□ 1.03
Ercc2O08811 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Ercc2O08811 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ercc2O08811 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.48■■□□□ 1.03
Ercc2O08811 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ercc2O08811 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms