Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ebf3O08791 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ebf3O08791 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ebf3O08791 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Ebf3O08791 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ebf3O08791 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ebf3O08791 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ebf3O08791 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Ebf3O08791 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ebf3O08791 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ebf3O08791 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf3O08791 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf3O08791 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Ebf3O08791 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf3O08791 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf3O08791 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.82■■□□□ 1.08
Ebf3O08791 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf3O08791 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf3O08791 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ebf3O08791 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Ebf3O08791 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.81■■□□□ 1.08
Ebf3O08791 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ebf3O08791 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ebf3O08791 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.81■■□□□ 1.08
Ebf3O08791 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.81■■□□□ 1.08
Ebf3O08791 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ebf3O08791 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
Ebf3O08791 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ebf3O08791 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ebf3O08791 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ebf3O08791 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.8■■□□□ 1.08
Ebf3O08791 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ebf3O08791 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ebf3O08791 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ebf3O08791 Gm12922-201ENSMUST00000120626 809 ntBASIC21.8■■□□□ 1.08
Ebf3O08791 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.8■■□□□ 1.08
Ebf3O08791 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ebf3O08791 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ebf3O08791 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ebf3O08791 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ebf3O08791 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ebf3O08791 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Ebf3O08791 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ebf3O08791 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ebf3O08791 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.79■■□□□ 1.08
Ebf3O08791 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.79■■□□□ 1.08
Ebf3O08791 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ebf3O08791 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ebf3O08791 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.78■■□□□ 1.08
Ebf3O08791 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ebf3O08791 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ebf3O08791 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.78■■□□□ 1.08
Ebf3O08791 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ebf3O08791 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ebf3O08791 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ebf3O08791 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ebf3O08791 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.77■■□□□ 1.08
Ebf3O08791 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ebf3O08791 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ebf3O08791 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ebf3O08791 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ebf3O08791 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ebf3O08791 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ebf3O08791 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ebf3O08791 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ebf3O08791 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ebf3O08791 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ebf3O08791 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.74■■□□□ 1.07
Ebf3O08791 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ebf3O08791 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.74■■□□□ 1.07
Ebf3O08791 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ebf3O08791 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ebf3O08791 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ebf3O08791 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf3O08791 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf3O08791 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf3O08791 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf3O08791 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.73■■□□□ 1.07
Ebf3O08791 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ebf3O08791 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ebf3O08791 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ebf3O08791 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.72■■□□□ 1.07
Ebf3O08791 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ebf3O08791 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.72■■□□□ 1.07
Ebf3O08791 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ebf3O08791 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ebf3O08791 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf3O08791 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.71■■□□□ 1.07
Ebf3O08791 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.71■■□□□ 1.07
Ebf3O08791 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.71■■□□□ 1.07
Ebf3O08791 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf3O08791 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.71■■□□□ 1.07
Ebf3O08791 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.71■■□□□ 1.07
Ebf3O08791 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf3O08791 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf3O08791 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf3O08791 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf3O08791 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.71■■□□□ 1.07
Ebf3O08791 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf3O08791 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms