Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Cdr1E9Q0B4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdr1E9Q0B4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdr1E9Q0B4 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.67■□□□□ 0.9
Cdr1E9Q0B4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.67■□□□□ 0.9
Cdr1E9Q0B4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cdr1E9Q0B4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cdr1E9Q0B4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Iqck-206ENSMUST00000208658 2891 ntBASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdr1E9Q0B4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.65■□□□□ 0.9
Cdr1E9Q0B4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdr1E9Q0B4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.64■□□□□ 0.9
Cdr1E9Q0B4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdr1E9Q0B4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Cdr1E9Q0B4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.64■□□□□ 0.89
Cdr1E9Q0B4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdr1E9Q0B4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdr1E9Q0B4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.64■□□□□ 0.89
Cdr1E9Q0B4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.64■□□□□ 0.89
Cdr1E9Q0B4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdr1E9Q0B4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
Cdr1E9Q0B4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cdr1E9Q0B4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdr1E9Q0B4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.63■□□□□ 0.89
Cdr1E9Q0B4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cdr1E9Q0B4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdr1E9Q0B4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.63■□□□□ 0.89
Cdr1E9Q0B4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cdr1E9Q0B4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdr1E9Q0B4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Cdr1E9Q0B4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdr1E9Q0B4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdr1E9Q0B4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdr1E9Q0B4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdr1E9Q0B4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdr1E9Q0B4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdr1E9Q0B4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdr1E9Q0B4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdr1E9Q0B4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Cdr1E9Q0B4 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.62■□□□□ 0.89
Cdr1E9Q0B4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdr1E9Q0B4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cdr1E9Q0B4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cdr1E9Q0B4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cdr1E9Q0B4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.61■□□□□ 0.89
Cdr1E9Q0B4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdr1E9Q0B4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdr1E9Q0B4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cdr1E9Q0B4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Cdr1E9Q0B4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdr1E9Q0B4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdr1E9Q0B4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdr1E9Q0B4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.6■□□□□ 0.89
Cdr1E9Q0B4 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.6■□□□□ 0.89
Cdr1E9Q0B4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.6■□□□□ 0.89
Cdr1E9Q0B4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdr1E9Q0B4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdr1E9Q0B4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.59■□□□□ 0.89
Cdr1E9Q0B4 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.59■□□□□ 0.89
Cdr1E9Q0B4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cdr1E9Q0B4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdr1E9Q0B4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdr1E9Q0B4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdr1E9Q0B4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdr1E9Q0B4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdr1E9Q0B4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdr1E9Q0B4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdr1E9Q0B4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.58■□□□□ 0.89
Cdr1E9Q0B4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdr1E9Q0B4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.58■□□□□ 0.88
Cdr1E9Q0B4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdr1E9Q0B4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdr1E9Q0B4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdr1E9Q0B4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdr1E9Q0B4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdr1E9Q0B4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.57■□□□□ 0.88
Cdr1E9Q0B4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdr1E9Q0B4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdr1E9Q0B4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cdr1E9Q0B4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdr1E9Q0B4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cdr1E9Q0B4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdr1E9Q0B4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdr1E9Q0B4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdr1E9Q0B4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdr1E9Q0B4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdr1E9Q0B4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdr1E9Q0B4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdr1E9Q0B4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms