Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
Trav13n-4A0A0G2JG01 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13n-4A0A0G2JG01 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13n-4A0A0G2JG01 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav13n-4A0A0G2JG01 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13n-4A0A0G2JG01 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13n-4A0A0G2JG01 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13n-4A0A0G2JG01 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13n-4A0A0G2JG01 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13n-4A0A0G2JG01 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13n-4A0A0G2JG01 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.94■□□□□ 0.3
Trav13n-4A0A0G2JG01 Gm45102-201ENSMUST00000207427 857 ntBASIC16.94■□□□□ 0.3
Trav13n-4A0A0G2JG01 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.94■□□□□ 0.3
Trav13n-4A0A0G2JG01 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13n-4A0A0G2JG01 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav13n-4A0A0G2JG01 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-4A0A0G2JG01 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-4A0A0G2JG01 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-4A0A0G2JG01 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-4A0A0G2JG01 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-4A0A0G2JG01 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-4A0A0G2JG01 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-4A0A0G2JG01 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav13n-4A0A0G2JG01 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-4A0A0G2JG01 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-4A0A0G2JG01 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-4A0A0G2JG01 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-4A0A0G2JG01 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav13n-4A0A0G2JG01 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-4A0A0G2JG01 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-4A0A0G2JG01 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-4A0A0G2JG01 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav13n-4A0A0G2JG01 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-4A0A0G2JG01 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-4A0A0G2JG01 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-4A0A0G2JG01 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13n-4A0A0G2JG01 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13n-4A0A0G2JG01 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Trav13n-4A0A0G2JG01 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13n-4A0A0G2JG01 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13n-4A0A0G2JG01 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13n-4A0A0G2JG01 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13n-4A0A0G2JG01 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav13n-4A0A0G2JG01 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav13n-4A0A0G2JG01 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav13n-4A0A0G2JG01 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav13n-4A0A0G2JG01 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13n-4A0A0G2JG01 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13n-4A0A0G2JG01 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13n-4A0A0G2JG01 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.9■□□□□ 0.3
Trav13n-4A0A0G2JG01 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13n-4A0A0G2JG01 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav13n-4A0A0G2JG01 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13n-4A0A0G2JG01 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav13n-4A0A0G2JG01 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav13n-4A0A0G2JG01 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13n-4A0A0G2JG01 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13n-4A0A0G2JG01 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13n-4A0A0G2JG01 Gm9959-201ENSMUST00000068277 390 ntBASIC16.89■□□□□ 0.29
Trav13n-4A0A0G2JG01 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.89■□□□□ 0.29
Trav13n-4A0A0G2JG01 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13n-4A0A0G2JG01 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13n-4A0A0G2JG01 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.88■□□□□ 0.29
Trav13n-4A0A0G2JG01 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.88■□□□□ 0.29
Trav13n-4A0A0G2JG01 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13n-4A0A0G2JG01 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav13n-4A0A0G2JG01 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.88■□□□□ 0.29
Trav13n-4A0A0G2JG01 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13n-4A0A0G2JG01 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav13n-4A0A0G2JG01 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav13n-4A0A0G2JG01 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13n-4A0A0G2JG01 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav13n-4A0A0G2JG01 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-4A0A0G2JG01 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-4A0A0G2JG01 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-4A0A0G2JG01 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-4A0A0G2JG01 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav13n-4A0A0G2JG01 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-4A0A0G2JG01 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-4A0A0G2JG01 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-4A0A0G2JG01 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-4A0A0G2JG01 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav13n-4A0A0G2JG01 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-4A0A0G2JG01 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-4A0A0G2JG01 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13n-4A0A0G2JG01 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13n-4A0A0G2JG01 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.85■□□□□ 0.29
Trav13n-4A0A0G2JG01 Gm10232-201ENSMUST00000089221 720 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms