Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.18■□□□□ 0.18
Trav7-1A0A0G2JEV5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-1A0A0G2JEV5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-1A0A0G2JEV5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-1A0A0G2JEV5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav7-1A0A0G2JEV5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-1A0A0G2JEV5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-1A0A0G2JEV5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-1A0A0G2JEV5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav7-1A0A0G2JEV5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7-1A0A0G2JEV5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.16■□□□□ 0.18
Trav7-1A0A0G2JEV5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7-1A0A0G2JEV5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-1A0A0G2JEV5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-1A0A0G2JEV5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.15■□□□□ 0.18
Trav7-1A0A0G2JEV5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-1A0A0G2JEV5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav7-1A0A0G2JEV5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-1A0A0G2JEV5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-1A0A0G2JEV5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trav7-1A0A0G2JEV5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-1A0A0G2JEV5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Trav7-1A0A0G2JEV5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav7-1A0A0G2JEV5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-1A0A0G2JEV5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-1A0A0G2JEV5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-1A0A0G2JEV5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-1A0A0G2JEV5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-1A0A0G2JEV5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-1A0A0G2JEV5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-1A0A0G2JEV5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-1A0A0G2JEV5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-1A0A0G2JEV5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-1A0A0G2JEV5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-1A0A0G2JEV5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-1A0A0G2JEV5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-1A0A0G2JEV5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav7-1A0A0G2JEV5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-1A0A0G2JEV5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav7-1A0A0G2JEV5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-1A0A0G2JEV5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-1A0A0G2JEV5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-1A0A0G2JEV5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-1A0A0G2JEV5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav7-1A0A0G2JEV5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav7-1A0A0G2JEV5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-1A0A0G2JEV5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-1A0A0G2JEV5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav7-1A0A0G2JEV5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-1A0A0G2JEV5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Trav7-1A0A0G2JEV5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-1A0A0G2JEV5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Trav7-1A0A0G2JEV5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-1A0A0G2JEV5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-1A0A0G2JEV5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-1A0A0G2JEV5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-1A0A0G2JEV5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-1A0A0G2JEV5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav7-1A0A0G2JEV5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-1A0A0G2JEV5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.09■□□□□ 0.17
Trav7-1A0A0G2JEV5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav7-1A0A0G2JEV5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-1A0A0G2JEV5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-1A0A0G2JEV5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-1A0A0G2JEV5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-1A0A0G2JEV5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav7-1A0A0G2JEV5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.09■□□□□ 0.17
Trav7-1A0A0G2JEV5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Trav7-1A0A0G2JEV5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.08■□□□□ 0.17
Trav7-1A0A0G2JEV5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7-1A0A0G2JEV5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7-1A0A0G2JEV5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-1A0A0G2JEV5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav7-1A0A0G2JEV5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav7-1A0A0G2JEV5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-1A0A0G2JEV5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-1A0A0G2JEV5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav7-1A0A0G2JEV5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav7-1A0A0G2JEV5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-1A0A0G2JEV5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav7-1A0A0G2JEV5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav7-1A0A0G2JEV5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms