Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav19A0A0B4J1K4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav19A0A0B4J1K4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav19A0A0B4J1K4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav19A0A0B4J1K4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav19A0A0B4J1K4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav19A0A0B4J1K4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav19A0A0B4J1K4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav19A0A0B4J1K4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav19A0A0B4J1K4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav19A0A0B4J1K4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav19A0A0B4J1K4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav19A0A0B4J1K4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav19A0A0B4J1K4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav19A0A0B4J1K4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav19A0A0B4J1K4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav19A0A0B4J1K4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav19A0A0B4J1K4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav19A0A0B4J1K4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trav19A0A0B4J1K4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav19A0A0B4J1K4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav19A0A0B4J1K4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav19A0A0B4J1K4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav19A0A0B4J1K4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
Trav19A0A0B4J1K4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav19A0A0B4J1K4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav19A0A0B4J1K4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav19A0A0B4J1K4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav19A0A0B4J1K4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav19A0A0B4J1K4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav19A0A0B4J1K4 Notumos-201ENSMUST00000151998 2659 ntBASIC15.64■□□□□ 0.09
Trav19A0A0B4J1K4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Trav19A0A0B4J1K4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav19A0A0B4J1K4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav19A0A0B4J1K4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav19A0A0B4J1K4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav19A0A0B4J1K4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav19A0A0B4J1K4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav19A0A0B4J1K4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav19A0A0B4J1K4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav19A0A0B4J1K4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav19A0A0B4J1K4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav19A0A0B4J1K4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav19A0A0B4J1K4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav19A0A0B4J1K4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav19A0A0B4J1K4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trav19A0A0B4J1K4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav19A0A0B4J1K4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav19A0A0B4J1K4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.61■□□□□ 0.09
Trav19A0A0B4J1K4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav19A0A0B4J1K4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav19A0A0B4J1K4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav19A0A0B4J1K4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav19A0A0B4J1K4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav19A0A0B4J1K4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav19A0A0B4J1K4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav19A0A0B4J1K4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Gm6311-201ENSMUST00000073790 878 ntBASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav19A0A0B4J1K4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav19A0A0B4J1K4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav19A0A0B4J1K4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav19A0A0B4J1K4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav19A0A0B4J1K4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms