Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv5-43A0A0B4J1J2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.76■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.76■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.75■■□□□ 1.07
Igkv5-43A0A0B4J1J2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-43A0A0B4J1J2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.71■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Igkv5-43A0A0B4J1J2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-43A0A0B4J1J2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv5-43A0A0B4J1J2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Igkv5-43A0A0B4J1J2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv5-43A0A0B4J1J2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.66■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv5-43A0A0B4J1J2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.65■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv5-43A0A0B4J1J2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.64■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Igkv5-43A0A0B4J1J2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.62■■□□□ 1.05
Igkv5-43A0A0B4J1J2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.62■■□□□ 1.05
Igkv5-43A0A0B4J1J2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.62■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.62■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms