Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv19A0A0B4J1H4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv19A0A0B4J1H4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv19A0A0B4J1H4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv19A0A0B4J1H4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Trbv19A0A0B4J1H4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.87■□□□□ 0.29
Trbv19A0A0B4J1H4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv19A0A0B4J1H4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv19A0A0B4J1H4 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.87■□□□□ 0.29
Trbv19A0A0B4J1H4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trbv19A0A0B4J1H4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv19A0A0B4J1H4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv19A0A0B4J1H4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv19A0A0B4J1H4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.86■□□□□ 0.29
Trbv19A0A0B4J1H4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.86■□□□□ 0.29
Trbv19A0A0B4J1H4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.86■□□□□ 0.29
Trbv19A0A0B4J1H4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv19A0A0B4J1H4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv19A0A0B4J1H4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv19A0A0B4J1H4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv19A0A0B4J1H4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv19A0A0B4J1H4 Gm10420-201ENSMUST00000121713 882 ntBASIC16.85■□□□□ 0.29
Trbv19A0A0B4J1H4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv19A0A0B4J1H4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv19A0A0B4J1H4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv19A0A0B4J1H4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv19A0A0B4J1H4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv19A0A0B4J1H4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv19A0A0B4J1H4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trbv19A0A0B4J1H4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv19A0A0B4J1H4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv19A0A0B4J1H4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv19A0A0B4J1H4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv19A0A0B4J1H4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv19A0A0B4J1H4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv19A0A0B4J1H4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv19A0A0B4J1H4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv19A0A0B4J1H4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv19A0A0B4J1H4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trbv19A0A0B4J1H4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trbv19A0A0B4J1H4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Trbv19A0A0B4J1H4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv19A0A0B4J1H4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.83■□□□□ 0.28
Trbv19A0A0B4J1H4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv19A0A0B4J1H4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv19A0A0B4J1H4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv19A0A0B4J1H4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv19A0A0B4J1H4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv19A0A0B4J1H4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv19A0A0B4J1H4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trbv19A0A0B4J1H4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trbv19A0A0B4J1H4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv19A0A0B4J1H4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trbv19A0A0B4J1H4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trbv19A0A0B4J1H4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv19A0A0B4J1H4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv19A0A0B4J1H4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trbv19A0A0B4J1H4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.82■□□□□ 0.28
Trbv19A0A0B4J1H4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.82■□□□□ 0.28
Trbv19A0A0B4J1H4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv19A0A0B4J1H4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv19A0A0B4J1H4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.81■□□□□ 0.28
Trbv19A0A0B4J1H4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv19A0A0B4J1H4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.81■□□□□ 0.28
Trbv19A0A0B4J1H4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv19A0A0B4J1H4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv19A0A0B4J1H4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trbv19A0A0B4J1H4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv19A0A0B4J1H4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trbv19A0A0B4J1H4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv19A0A0B4J1H4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.8■□□□□ 0.28
Trbv19A0A0B4J1H4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv19A0A0B4J1H4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv19A0A0B4J1H4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv19A0A0B4J1H4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv19A0A0B4J1H4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv19A0A0B4J1H4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trbv19A0A0B4J1H4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv19A0A0B4J1H4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Trbv19A0A0B4J1H4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv19A0A0B4J1H4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv19A0A0B4J1H4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trbv19A0A0B4J1H4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv19A0A0B4J1H4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv19A0A0B4J1H4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv19A0A0B4J1H4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.78■□□□□ 0.28
Trbv19A0A0B4J1H4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv19A0A0B4J1H4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms