Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ighv1-20A0A0A6YX66 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-20A0A0A6YX66 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-20A0A0A6YX66 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Ighv1-20A0A0A6YX66 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-20A0A0A6YX66 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-20A0A0A6YX66 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-20A0A0A6YX66 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-20A0A0A6YX66 Gm10620-201ENSMUST00000098379 1332 ntBASIC17■□□□□ 0.31
Ighv1-20A0A0A6YX66 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Ighv1-20A0A0A6YX66 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17■□□□□ 0.31
Ighv1-20A0A0A6YX66 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17■□□□□ 0.31
Ighv1-20A0A0A6YX66 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-20A0A0A6YX66 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-20A0A0A6YX66 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Ighv1-20A0A0A6YX66 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17■□□□□ 0.31
Ighv1-20A0A0A6YX66 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-20A0A0A6YX66 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-20A0A0A6YX66 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.99■□□□□ 0.31
Ighv1-20A0A0A6YX66 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ighv1-20A0A0A6YX66 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-20A0A0A6YX66 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-20A0A0A6YX66 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.99■□□□□ 0.31
Ighv1-20A0A0A6YX66 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.99■□□□□ 0.31
Ighv1-20A0A0A6YX66 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-20A0A0A6YX66 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-20A0A0A6YX66 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-20A0A0A6YX66 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
Ighv1-20A0A0A6YX66 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-20A0A0A6YX66 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-20A0A0A6YX66 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-20A0A0A6YX66 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-20A0A0A6YX66 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-20A0A0A6YX66 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-20A0A0A6YX66 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ighv1-20A0A0A6YX66 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-20A0A0A6YX66 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-20A0A0A6YX66 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-20A0A0A6YX66 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-20A0A0A6YX66 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.96■□□□□ 0.3
Ighv1-20A0A0A6YX66 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv1-20A0A0A6YX66 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ighv1-20A0A0A6YX66 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-20A0A0A6YX66 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-20A0A0A6YX66 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-20A0A0A6YX66 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-20A0A0A6YX66 Gm22238-201ENSMUST00000175222 88 ntBASIC16.95■□□□□ 0.3
Ighv1-20A0A0A6YX66 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ighv1-20A0A0A6YX66 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-20A0A0A6YX66 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-20A0A0A6YX66 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-20A0A0A6YX66 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Ighv1-20A0A0A6YX66 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-20A0A0A6YX66 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-20A0A0A6YX66 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ighv1-20A0A0A6YX66 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ighv1-20A0A0A6YX66 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.94■□□□□ 0.3
Ighv1-20A0A0A6YX66 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ighv1-20A0A0A6YX66 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-20A0A0A6YX66 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-20A0A0A6YX66 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ighv1-20A0A0A6YX66 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.93■□□□□ 0.3
Ighv1-20A0A0A6YX66 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-20A0A0A6YX66 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-20A0A0A6YX66 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-20A0A0A6YX66 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.93■□□□□ 0.3
Ighv1-20A0A0A6YX66 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.93■□□□□ 0.3
Ighv1-20A0A0A6YX66 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms