Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
Trbv21A0A0A6YX06 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv21A0A0A6YX06 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.55■□□□□ 0.72
Trbv21A0A0A6YX06 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv21A0A0A6YX06 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv21A0A0A6YX06 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv21A0A0A6YX06 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv21A0A0A6YX06 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv21A0A0A6YX06 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trbv21A0A0A6YX06 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv21A0A0A6YX06 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.54■□□□□ 0.72
Trbv21A0A0A6YX06 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Trbv21A0A0A6YX06 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv21A0A0A6YX06 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv21A0A0A6YX06 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv21A0A0A6YX06 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv21A0A0A6YX06 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv21A0A0A6YX06 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trbv21A0A0A6YX06 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv21A0A0A6YX06 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv21A0A0A6YX06 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.53■□□□□ 0.72
Trbv21A0A0A6YX06 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv21A0A0A6YX06 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv21A0A0A6YX06 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv21A0A0A6YX06 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv21A0A0A6YX06 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv21A0A0A6YX06 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv21A0A0A6YX06 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv21A0A0A6YX06 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Trbv21A0A0A6YX06 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv21A0A0A6YX06 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.52■□□□□ 0.72
Trbv21A0A0A6YX06 Gm5921-201ENSMUST00000075898 882 ntBASIC19.52■□□□□ 0.72
Trbv21A0A0A6YX06 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv21A0A0A6YX06 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv21A0A0A6YX06 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trbv21A0A0A6YX06 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trbv21A0A0A6YX06 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv21A0A0A6YX06 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv21A0A0A6YX06 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.51■□□□□ 0.71
Trbv21A0A0A6YX06 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trbv21A0A0A6YX06 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv21A0A0A6YX06 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv21A0A0A6YX06 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Trbv21A0A0A6YX06 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.5■□□□□ 0.71
Trbv21A0A0A6YX06 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv21A0A0A6YX06 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv21A0A0A6YX06 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv21A0A0A6YX06 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.5■□□□□ 0.71
Trbv21A0A0A6YX06 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv21A0A0A6YX06 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv21A0A0A6YX06 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv21A0A0A6YX06 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv21A0A0A6YX06 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Trbv21A0A0A6YX06 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv21A0A0A6YX06 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv21A0A0A6YX06 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv21A0A0A6YX06 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.48■□□□□ 0.71
Trbv21A0A0A6YX06 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv21A0A0A6YX06 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv21A0A0A6YX06 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv21A0A0A6YX06 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.48■□□□□ 0.71
Trbv21A0A0A6YX06 Gm43566-201ENSMUST00000196851 808 ntBASIC19.48■□□□□ 0.71
Trbv21A0A0A6YX06 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv21A0A0A6YX06 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv21A0A0A6YX06 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.47■□□□□ 0.71
Trbv21A0A0A6YX06 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv21A0A0A6YX06 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv21A0A0A6YX06 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv21A0A0A6YX06 Gm13238-201ENSMUST00000117655 780 ntBASIC19.47■□□□□ 0.71
Trbv21A0A0A6YX06 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv21A0A0A6YX06 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trbv21A0A0A6YX06 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv21A0A0A6YX06 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv21A0A0A6YX06 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.46■□□□□ 0.71
Trbv21A0A0A6YX06 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv21A0A0A6YX06 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv21A0A0A6YX06 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.46■□□□□ 0.71
Trbv21A0A0A6YX06 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv21A0A0A6YX06 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv21A0A0A6YX06 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv21A0A0A6YX06 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv21A0A0A6YX06 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
Trbv21A0A0A6YX06 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv21A0A0A6YX06 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.45■□□□□ 0.7
Trbv21A0A0A6YX06 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv21A0A0A6YX06 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv21A0A0A6YX06 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv21A0A0A6YX06 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv21A0A0A6YX06 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv21A0A0A6YX06 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.43■□□□□ 0.7
Trbv21A0A0A6YX06 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv21A0A0A6YX06 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.43■□□□□ 0.7
Trbv21A0A0A6YX06 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms