Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.3■□□□□ 0.68
Trbc1A0A0A6YWV4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Trbc1A0A0A6YWV4 Gm10232-201ENSMUST00000089221 720 ntBASIC19.29■□□□□ 0.68
Trbc1A0A0A6YWV4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbc1A0A0A6YWV4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbc1A0A0A6YWV4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbc1A0A0A6YWV4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbc1A0A0A6YWV4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trbc1A0A0A6YWV4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.28■□□□□ 0.68
Trbc1A0A0A6YWV4 Gm15820-201ENSMUST00000201566 728 ntBASIC19.28■□□□□ 0.68
Trbc1A0A0A6YWV4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trbc1A0A0A6YWV4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trbc1A0A0A6YWV4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbc1A0A0A6YWV4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trbc1A0A0A6YWV4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trbc1A0A0A6YWV4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trbc1A0A0A6YWV4 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.27■□□□□ 0.68
Trbc1A0A0A6YWV4 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.27■□□□□ 0.68
Trbc1A0A0A6YWV4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Trbc1A0A0A6YWV4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trbc1A0A0A6YWV4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbc1A0A0A6YWV4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trbc1A0A0A6YWV4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trbc1A0A0A6YWV4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbc1A0A0A6YWV4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbc1A0A0A6YWV4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbc1A0A0A6YWV4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbc1A0A0A6YWV4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbc1A0A0A6YWV4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trbc1A0A0A6YWV4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trbc1A0A0A6YWV4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.26■□□□□ 0.67
Trbc1A0A0A6YWV4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbc1A0A0A6YWV4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbc1A0A0A6YWV4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.25■□□□□ 0.67
Trbc1A0A0A6YWV4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.25■□□□□ 0.67
Trbc1A0A0A6YWV4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbc1A0A0A6YWV4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbc1A0A0A6YWV4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trbc1A0A0A6YWV4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbc1A0A0A6YWV4 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.24■□□□□ 0.67
Trbc1A0A0A6YWV4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbc1A0A0A6YWV4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trbc1A0A0A6YWV4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbc1A0A0A6YWV4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbc1A0A0A6YWV4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbc1A0A0A6YWV4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trbc1A0A0A6YWV4 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.23■□□□□ 0.67
Trbc1A0A0A6YWV4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.23■□□□□ 0.67
Trbc1A0A0A6YWV4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbc1A0A0A6YWV4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbc1A0A0A6YWV4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.22■□□□□ 0.67
Trbc1A0A0A6YWV4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbc1A0A0A6YWV4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbc1A0A0A6YWV4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbc1A0A0A6YWV4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbc1A0A0A6YWV4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbc1A0A0A6YWV4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbc1A0A0A6YWV4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbc1A0A0A6YWV4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbc1A0A0A6YWV4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Trbc1A0A0A6YWV4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trbc1A0A0A6YWV4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbc1A0A0A6YWV4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trbc1A0A0A6YWV4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbc1A0A0A6YWV4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbc1A0A0A6YWV4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbc1A0A0A6YWV4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbc1A0A0A6YWV4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbc1A0A0A6YWV4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbc1A0A0A6YWV4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbc1A0A0A6YWV4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbc1A0A0A6YWV4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbc1A0A0A6YWV4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbc1A0A0A6YWV4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trbc1A0A0A6YWV4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbc1A0A0A6YWV4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbc1A0A0A6YWV4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbc1A0A0A6YWV4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbc1A0A0A6YWV4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbc1A0A0A6YWV4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.19■□□□□ 0.66
Trbc1A0A0A6YWV4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbc1A0A0A6YWV4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbc1A0A0A6YWV4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbc1A0A0A6YWV4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Trbc1A0A0A6YWV4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbc1A0A0A6YWV4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbc1A0A0A6YWV4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.18■□□□□ 0.66
Trbc1A0A0A6YWV4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trbc1A0A0A6YWV4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbc1A0A0A6YWV4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.18■□□□□ 0.66
Trbc1A0A0A6YWV4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Trbc1A0A0A6YWV4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbc1A0A0A6YWV4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbc1A0A0A6YWV4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbc1A0A0A6YWV4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.17■□□□□ 0.66
Trbc1A0A0A6YWV4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbc1A0A0A6YWV4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbc1A0A0A6YWV4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trbc1A0A0A6YWV4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trbc1A0A0A6YWV4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 147.4 ms