Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Gm28778A0A087WSK7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm28778A0A087WSK7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28778A0A087WSK7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28778A0A087WSK7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28778A0A087WSK7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Gm28778A0A087WSK7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28778A0A087WSK7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Gm28778A0A087WSK7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm28778A0A087WSK7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28778A0A087WSK7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28778A0A087WSK7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28778A0A087WSK7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28778A0A087WSK7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28778A0A087WSK7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28778A0A087WSK7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm28778A0A087WSK7 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.13■□□□□ 0.33
Gm28778A0A087WSK7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Gm28778A0A087WSK7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28778A0A087WSK7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28778A0A087WSK7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28778A0A087WSK7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28778A0A087WSK7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
Gm28778A0A087WSK7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28778A0A087WSK7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28778A0A087WSK7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28778A0A087WSK7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm28778A0A087WSK7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28778A0A087WSK7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28778A0A087WSK7 Gm15546-201ENSMUST00000122095 826 ntBASIC17.11■□□□□ 0.33
Gm28778A0A087WSK7 Gm15820-201ENSMUST00000201566 728 ntBASIC17.11■□□□□ 0.33
Gm28778A0A087WSK7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm28778A0A087WSK7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28778A0A087WSK7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Gm28778A0A087WSK7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28778A0A087WSK7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28778A0A087WSK7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28778A0A087WSK7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28778A0A087WSK7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm28778A0A087WSK7 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.1■□□□□ 0.33
Gm28778A0A087WSK7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28778A0A087WSK7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm28778A0A087WSK7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28778A0A087WSK7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.09■□□□□ 0.33
Gm28778A0A087WSK7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.09■□□□□ 0.33
Gm28778A0A087WSK7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28778A0A087WSK7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28778A0A087WSK7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm28778A0A087WSK7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm28778A0A087WSK7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28778A0A087WSK7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28778A0A087WSK7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28778A0A087WSK7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28778A0A087WSK7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28778A0A087WSK7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.08■□□□□ 0.32
Gm28778A0A087WSK7 Gm10399-202ENSMUST00000202768 748 ntBASIC17.08■□□□□ 0.32
Gm28778A0A087WSK7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28778A0A087WSK7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28778A0A087WSK7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28778A0A087WSK7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28778A0A087WSK7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gm28778A0A087WSK7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28778A0A087WSK7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28778A0A087WSK7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28778A0A087WSK7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28778A0A087WSK7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28778A0A087WSK7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.07■□□□□ 0.32
Gm28778A0A087WSK7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28778A0A087WSK7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28778A0A087WSK7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28778A0A087WSK7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.06■□□□□ 0.32
Gm28778A0A087WSK7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.06■□□□□ 0.32
Gm28778A0A087WSK7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28778A0A087WSK7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28778A0A087WSK7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28778A0A087WSK7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28778A0A087WSK7 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.05■□□□□ 0.32
Gm28778A0A087WSK7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28778A0A087WSK7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28778A0A087WSK7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gm28778A0A087WSK7 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.05■□□□□ 0.32
Gm28778A0A087WSK7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.05■□□□□ 0.32
Gm28778A0A087WSK7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28778A0A087WSK7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28778A0A087WSK7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Gm28778A0A087WSK7 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.04■□□□□ 0.32
Gm28778A0A087WSK7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28778A0A087WSK7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28778A0A087WSK7 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.04■□□□□ 0.32
Gm28778A0A087WSK7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28778A0A087WSK7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28778A0A087WSK7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28778A0A087WSK7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28778A0A087WSK7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28778A0A087WSK7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28778A0A087WSK7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28778A0A087WSK7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.03■□□□□ 0.32
Gm28778A0A087WSK7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm28778A0A087WSK7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28778A0A087WSK7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms