Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-3A0A075B6A4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-3A0A075B6A4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav12d-3A0A075B6A4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav12d-3A0A075B6A4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-3A0A075B6A4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav12d-3A0A075B6A4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-3A0A075B6A4 Gm24804-201ENSMUST00000174982 85 ntBASIC15.74■□□□□ 0.11
Trav12d-3A0A075B6A4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav12d-3A0A075B6A4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-3A0A075B6A4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-3A0A075B6A4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-3A0A075B6A4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12d-3A0A075B6A4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav12d-3A0A075B6A4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12d-3A0A075B6A4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12d-3A0A075B6A4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.73■□□□□ 0.11
Trav12d-3A0A075B6A4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-3A0A075B6A4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-3A0A075B6A4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Trav12d-3A0A075B6A4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav12d-3A0A075B6A4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav12d-3A0A075B6A4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.72■□□□□ 0.11
Trav12d-3A0A075B6A4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-3A0A075B6A4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-3A0A075B6A4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav12d-3A0A075B6A4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-3A0A075B6A4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-3A0A075B6A4 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.71■□□□□ 0.11
Trav12d-3A0A075B6A4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12d-3A0A075B6A4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav12d-3A0A075B6A4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12d-3A0A075B6A4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12d-3A0A075B6A4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav12d-3A0A075B6A4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav12d-3A0A075B6A4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12d-3A0A075B6A4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12d-3A0A075B6A4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12d-3A0A075B6A4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12d-3A0A075B6A4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12d-3A0A075B6A4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-3A0A075B6A4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-3A0A075B6A4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav12d-3A0A075B6A4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-3A0A075B6A4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-3A0A075B6A4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-3A0A075B6A4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-3A0A075B6A4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-3A0A075B6A4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav12d-3A0A075B6A4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-3A0A075B6A4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-3A0A075B6A4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12d-3A0A075B6A4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.68■□□□□ 0.1
Trav12d-3A0A075B6A4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12d-3A0A075B6A4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav12d-3A0A075B6A4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12d-3A0A075B6A4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12d-3A0A075B6A4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav12d-3A0A075B6A4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12d-3A0A075B6A4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav12d-3A0A075B6A4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12d-3A0A075B6A4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav12d-3A0A075B6A4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12d-3A0A075B6A4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-3A0A075B6A4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-3A0A075B6A4 Gm24970-201ENSMUST00000175582 82 ntBASIC15.67■□□□□ 0.1
Trav12d-3A0A075B6A4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-3A0A075B6A4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav12d-3A0A075B6A4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-3A0A075B6A4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-3A0A075B6A4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-3A0A075B6A4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-3A0A075B6A4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-3A0A075B6A4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-3A0A075B6A4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-3A0A075B6A4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms