Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16nA0A075B634 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16nA0A075B634 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16nA0A075B634 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16nA0A075B634 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16nA0A075B634 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav16nA0A075B634 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav16nA0A075B634 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav16nA0A075B634 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav16nA0A075B634 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav16nA0A075B634 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav16nA0A075B634 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav16nA0A075B634 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav16nA0A075B634 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav16nA0A075B634 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav16nA0A075B634 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav16nA0A075B634 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trav16nA0A075B634 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav16nA0A075B634 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav16nA0A075B634 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav16nA0A075B634 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav16nA0A075B634 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav16nA0A075B634 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav16nA0A075B634 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav16nA0A075B634 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.83■□□□□ 0.12
Trav16nA0A075B634 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav16nA0A075B634 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav16nA0A075B634 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav16nA0A075B634 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav16nA0A075B634 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16nA0A075B634 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav16nA0A075B634 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16nA0A075B634 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.82■□□□□ 0.12
Trav16nA0A075B634 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16nA0A075B634 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16nA0A075B634 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16nA0A075B634 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav16nA0A075B634 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16nA0A075B634 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav16nA0A075B634 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16nA0A075B634 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16nA0A075B634 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16nA0A075B634 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16nA0A075B634 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16nA0A075B634 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16nA0A075B634 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.8■□□□□ 0.12
Trav16nA0A075B634 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16nA0A075B634 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16nA0A075B634 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16nA0A075B634 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16nA0A075B634 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav16nA0A075B634 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.8■□□□□ 0.12
Trav16nA0A075B634 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16nA0A075B634 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav16nA0A075B634 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16nA0A075B634 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16nA0A075B634 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Trav16nA0A075B634 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16nA0A075B634 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16nA0A075B634 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trav16nA0A075B634 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16nA0A075B634 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav16nA0A075B634 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16nA0A075B634 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.78■□□□□ 0.12
Trav16nA0A075B634 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav16nA0A075B634 Gm7432-201ENSMUST00000210343 879 ntBASIC15.78■□□□□ 0.12
Trav16nA0A075B634 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav16nA0A075B634 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16nA0A075B634 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16nA0A075B634 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16nA0A075B634 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16nA0A075B634 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16nA0A075B634 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16nA0A075B634 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16nA0A075B634 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16nA0A075B634 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16nA0A075B634 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trav16nA0A075B634 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav16nA0A075B634 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav16nA0A075B634 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav16nA0A075B634 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav16nA0A075B634 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16nA0A075B634 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16nA0A075B634 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16nA0A075B634 Gm44428-201ENSMUST00000204474 874 ntBASIC15.76■□□□□ 0.11
Trav16nA0A075B634 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav16nA0A075B634 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16nA0A075B634 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16nA0A075B634 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16nA0A075B634 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16nA0A075B634 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16nA0A075B634 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16nA0A075B634 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16nA0A075B634 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16nA0A075B634 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16nA0A075B634 Gm11599-201ENSMUST00000118720 878 ntBASIC15.75■□□□□ 0.11
Trav16nA0A075B634 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16nA0A075B634 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16nA0A075B634 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16nA0A075B634 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms