Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm22442-201ENSMUST00000157256 144 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Mir7076-201ENSMUST00000183519 74 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm29615-201ENSMUST00000185371 697 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm28224-201ENSMUST00000186078 697 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm29001-201ENSMUST00000186177 697 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm28292-201ENSMUST00000186593 697 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm28101-201ENSMUST00000187608 697 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm29076-201ENSMUST00000187689 697 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm28302-201ENSMUST00000187931 697 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm28646-201ENSMUST00000188220 697 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm28205-201ENSMUST00000189177 697 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm29032-201ENSMUST00000189797 697 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm28695-201ENSMUST00000190300 697 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm37448-201ENSMUST00000192795 697 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm5340-201ENSMUST00000203733 880 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 AC134537.1-201ENSMUST00000219205 265 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Mir744-201ENSMUST00000103261 100 ntBASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Gm12218-201ENSMUST00000117666 399 ntBASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Gm15711-201ENSMUST00000118889 535 ntBASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Gm11941-201ENSMUST00000119904 610 ntBASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Gm25043-201ENSMUST00000158604 212 ntBASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Gm5904-201ENSMUST00000210286 865 ntBASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col25a1Q99MQ5 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms