Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rnf111Q99ML9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.33□□□□□ -0.43
Rnf111Q99ML9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Rnf111Q99ML9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rnf111Q99ML9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Gm16372-201ENSMUST00000073088 450 ntBASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf111Q99ML9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Gm15806-201ENSMUST00000120696 955 ntBASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Gm9002-201ENSMUST00000178437 499 ntBASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Gm6244-201ENSMUST00000178732 841 ntBASIC12.32□□□□□ -0.44
Rnf111Q99ML9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Gm44069-201ENSMUST00000204898 506 ntBASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.32□□□□□ -0.44
Rnf111Q99ML9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf111Q99ML9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms