Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.58□□□□□ -0.24
TraipQ8VIG6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Gm45132-201ENSMUST00000207234 2542 ntBASIC13.58□□□□□ -0.24
TraipQ8VIG6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm12015-201ENSMUST00000117065 843 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm14999-201ENSMUST00000121039 624 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm14017-201ENSMUST00000121934 386 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm44967-201ENSMUST00000207047 631 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 CT010431.1-201ENSMUST00000221249 1080 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Mir433-201ENSMUST00000093564 124 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.57□□□□□ -0.24
TraipQ8VIG6 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.57□□□□□ -0.24
TraipQ8VIG6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TraipQ8VIG6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.56□□□□□ -0.24
TraipQ8VIG6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Gm16570-201ENSMUST00000161951 436 ntBASIC13.56□□□□□ -0.24
TraipQ8VIG6 Gm2383-201ENSMUST00000181461 807 ntBASIC13.56□□□□□ -0.24
TraipQ8VIG6 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.56□□□□□ -0.24
TraipQ8VIG6 Gm45186-201ENSMUST00000206874 478 ntBASIC13.56□□□□□ -0.24
TraipQ8VIG6 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Gm10076-201ENSMUST00000073238 384 ntBASIC13.56□□□□□ -0.24
TraipQ8VIG6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TraipQ8VIG6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms