Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Gm11434-201ENSMUST00000122379 629 ntBASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12□□□□□ -0.49
Ndc1Q8VCB1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12□□□□□ -0.49
Ndc1Q8VCB1 Gm7118-201ENSMUST00000200167 1003 ntBASIC12□□□□□ -0.49
Ndc1Q8VCB1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 AC166051.1-201ENSMUST00000214313 210 ntBASIC12□□□□□ -0.49
Ndc1Q8VCB1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Gm10176-201ENSMUST00000159707 2264 ntBASIC12□□□□□ -0.49
Ndc1Q8VCB1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Gm44775-201ENSMUST00000207266 1456 ntBASIC12□□□□□ -0.49
Ndc1Q8VCB1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Gm5385-201ENSMUST00000118988 1559 ntBASIC12□□□□□ -0.49
Ndc1Q8VCB1 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ndc1Q8VCB1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Gm38241-201ENSMUST00000192641 898 ntBASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Morn2-202ENSMUST00000227729 656 ntBASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms