Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Gm11637-201ENSMUST00000120601 592 ntBASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Gm23363-201ENSMUST00000175024 79 ntBASIC12.19□□□□□ -0.46
Lsm1Q8VC85 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Gm8515-201ENSMUST00000194852 576 ntBASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Gm8099-201ENSMUST00000200510 742 ntBASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Gm45384-201ENSMUST00000210451 277 ntBASIC12.19□□□□□ -0.46
Lsm1Q8VC85 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm1Q8VC85 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.18□□□□□ -0.46
Lsm1Q8VC85 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Snord83b-201ENSMUST00000104546 94 ntBASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Gm23984-201ENSMUST00000157139 203 ntBASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Gm37042-201ENSMUST00000193816 581 ntBASIC12.18□□□□□ -0.46
Lsm1Q8VC85 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Gm37497-201ENSMUST00000195830 798 ntBASIC12.18□□□□□ -0.46
Lsm1Q8VC85 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm1Q8VC85 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms