Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Gm13612-201ENSMUST00000119276 390 ntBASIC12.29□□□□□ -0.44
Rnf8Q8VC56 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Gm6152-201ENSMUST00000151704 340 ntBASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Gm43433-201ENSMUST00000196573 481 ntBASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Gm19931-201ENSMUST00000198920 368 ntBASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Gm38671-201ENSMUST00000200573 130 ntBASIC12.28□□□□□ -0.44
Rnf8Q8VC56 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf8Q8VC56 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf8Q8VC56 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rnf8Q8VC56 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf8Q8VC56 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.27□□□□□ -0.45
Rnf8Q8VC56 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.27□□□□□ -0.45
Rnf8Q8VC56 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms