Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.31□□□□□ -0.12
Syne4Q8CII8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Gm22133-201ENSMUST00000102082 109 ntBASIC14.31□□□□□ -0.12
Syne4Q8CII8 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Gm11989-201ENSMUST00000117240 672 ntBASIC14.31□□□□□ -0.12
Syne4Q8CII8 Gm11362-201ENSMUST00000118838 850 ntBASIC14.31□□□□□ -0.12
Syne4Q8CII8 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Gm7593-201ENSMUST00000187246 644 ntBASIC14.31□□□□□ -0.12
Syne4Q8CII8 Gm43058-201ENSMUST00000197645 625 ntBASIC14.31□□□□□ -0.12
Syne4Q8CII8 Gm45219-201ENSMUST00000205602 465 ntBASIC14.31□□□□□ -0.12
Syne4Q8CII8 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.31□□□□□ -0.12
Syne4Q8CII8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Gm12501-201ENSMUST00000119163 529 ntBASIC14.3□□□□□ -0.12
Syne4Q8CII8 Gm11941-201ENSMUST00000119904 610 ntBASIC14.3□□□□□ -0.12
Syne4Q8CII8 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.3□□□□□ -0.12
Syne4Q8CII8 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.3□□□□□ -0.12
Syne4Q8CII8 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.3□□□□□ -0.12
Syne4Q8CII8 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.3□□□□□ -0.12
Syne4Q8CII8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syne4Q8CII8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms