Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Gm11618-201ENSMUST00000117946 267 ntBASIC12.81□□□□□ -0.36
Clip4Q8CI96 Gm14660-201ENSMUST00000119809 575 ntBASIC12.81□□□□□ -0.36
Clip4Q8CI96 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.81□□□□□ -0.36
Clip4Q8CI96 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Gm37922-201ENSMUST00000195596 455 ntBASIC12.81□□□□□ -0.36
Clip4Q8CI96 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.81□□□□□ -0.36
Clip4Q8CI96 Gm44069-201ENSMUST00000204898 506 ntBASIC12.81□□□□□ -0.36
Clip4Q8CI96 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.81□□□□□ -0.36
Clip4Q8CI96 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.81□□□□□ -0.36
Clip4Q8CI96 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip4Q8CI96 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.8□□□□□ -0.36
Clip4Q8CI96 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Gm16202-201ENSMUST00000117532 544 ntBASIC12.8□□□□□ -0.36
Clip4Q8CI96 Gm16177-201ENSMUST00000120728 718 ntBASIC12.8□□□□□ -0.36
Clip4Q8CI96 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.8□□□□□ -0.36
Clip4Q8CI96 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Gm40466-201ENSMUST00000212174 422 ntBASIC12.8□□□□□ -0.36
Clip4Q8CI96 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.8□□□□□ -0.36
Clip4Q8CI96 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clip4Q8CI96 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Clip4Q8CI96 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip4Q8CI96 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip4Q8CI96 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clip4Q8CI96 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip4Q8CI96 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip4Q8CI96 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip4Q8CI96 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip4Q8CI96 Gm12384-201ENSMUST00000119228 919 ntBASIC12.79□□□□□ -0.36
Clip4Q8CI96 Gm13369-201ENSMUST00000119442 987 ntBASIC12.79□□□□□ -0.36
Clip4Q8CI96 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clip4Q8CI96 Gm4271-201ENSMUST00000174444 973 ntBASIC12.79□□□□□ -0.36
Clip4Q8CI96 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clip4Q8CI96 Mir7221-201ENSMUST00000184009 72 ntBASIC12.79□□□□□ -0.36
Clip4Q8CI96 Gm37497-201ENSMUST00000195830 798 ntBASIC12.79□□□□□ -0.36
Clip4Q8CI96 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms