Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC15.68■□□□□ 0.1
Smc5Q8CG46 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc5Q8CG46 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc5Q8CG46 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc5Q8CG46 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc5Q8CG46 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc5Q8CG46 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Smc5Q8CG46 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc5Q8CG46 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Gm43174-201ENSMUST00000195914 2445 ntBASIC15.67■□□□□ 0.1
Smc5Q8CG46 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Gm10012-201ENSMUST00000078252 192 ntBASIC15.67■□□□□ 0.1
Smc5Q8CG46 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.67■□□□□ 0.1
Smc5Q8CG46 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC15.67■□□□□ 0.1
Smc5Q8CG46 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.66■□□□□ 0.1
Smc5Q8CG46 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.66■□□□□ 0.1
Smc5Q8CG46 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Smc5Q8CG46 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Gm38092-201ENSMUST00000195600 653 ntBASIC15.66■□□□□ 0.1
Smc5Q8CG46 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Gm42599-201ENSMUST00000201308 469 ntBASIC15.66■□□□□ 0.1
Smc5Q8CG46 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Smc5Q8CG46 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.66■□□□□ 0.1
Smc5Q8CG46 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.66■□□□□ 0.1
Smc5Q8CG46 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 AC154517.2-201ENSMUST00000220829 2458 ntBASIC15.66■□□□□ 0.1
Smc5Q8CG46 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc5Q8CG46 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Rubie-203ENSMUST00000227803 2430 ntBASIC15.65■□□□□ 0.1
Smc5Q8CG46 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Gm2231-201ENSMUST00000125661 612 ntBASIC15.65■□□□□ 0.1
Smc5Q8CG46 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Smc5Q8CG46 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.65■□□□□ 0.1
Smc5Q8CG46 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.65■□□□□ 0.1
Smc5Q8CG46 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.65■□□□□ 0.1
Smc5Q8CG46 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc5Q8CG46 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms