Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Gm8602-201ENSMUST00000184045 607 ntBASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Gm27892-201ENSMUST00000185017 106 ntBASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Gm2495-201ENSMUST00000191160 466 ntBASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Gm13813-201ENSMUST00000120998 787 ntBASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc87Q8CDL9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Gm6244-201ENSMUST00000178732 841 ntBASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Gm44397-201ENSMUST00000195950 113 ntBASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Gm17794-201ENSMUST00000220252 955 ntBASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms