Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Gm23270-201ENSMUST00000104055 131 ntBASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Gm37201-201ENSMUST00000191845 523 ntBASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Shisa4Q8CA71 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.68□□□□□ -0.06
Shisa4Q8CA71 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Gm13570-201ENSMUST00000140763 309 ntBASIC14.68□□□□□ -0.06
Shisa4Q8CA71 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa4Q8CA71 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Gm13461-201ENSMUST00000120980 662 ntBASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Gm10076-201ENSMUST00000073238 384 ntBASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Gm24136-201ENSMUST00000083374 165 ntBASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa4Q8CA71 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms