Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pabpc5Q8C7D3 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gm11793-201ENSMUST00000120433 981 ntBASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gm43133-201ENSMUST00000197472 463 ntBASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pabpc5Q8C7D3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Gm25927-201ENSMUST00000175058 117 ntBASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Gm27320-201ENSMUST00000184892 109 ntBASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Snora73a-201ENSMUST00000082453 205 ntBASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pabpc5Q8C7D3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms