Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Gm12217-201ENSMUST00000118858 696 ntBASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Gm14208-201ENSMUST00000119645 678 ntBASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Gm44651-201ENSMUST00000207343 372 ntBASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Nsd1-205ENSMUST00000224693 852 ntBASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Gm8385-201ENSMUST00000058999 643 ntBASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rd3Q8BRE0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Gm14921-201ENSMUST00000118643 908 ntBASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Gm4909-201ENSMUST00000118749 794 ntBASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.46□□□□□ -0.25
Rd3Q8BRE0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Mir3547-201ENSMUST00000175461 88 ntBASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.46□□□□□ -0.25
Rd3Q8BRE0 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Gm10312-201ENSMUST00000078515 489 ntBASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.46□□□□□ -0.25
Rd3Q8BRE0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Rd3Q8BRE0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rd3Q8BRE0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Rd3Q8BRE0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.46□□□□□ -0.26
Rd3Q8BRE0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rd3Q8BRE0 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.46□□□□□ -0.26
Rd3Q8BRE0 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.46□□□□□ -0.26
Rd3Q8BRE0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rd3Q8BRE0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rd3Q8BRE0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rd3Q8BRE0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rd3Q8BRE0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.45□□□□□ -0.26
Rd3Q8BRE0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rd3Q8BRE0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rd3Q8BRE0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rd3Q8BRE0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.45□□□□□ -0.26
Rd3Q8BRE0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rd3Q8BRE0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rd3Q8BRE0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms