Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Gm12948-201ENSMUST00000119406 682 ntBASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Gm29499-201ENSMUST00000189151 486 ntBASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Gm28329-201ENSMUST00000191208 689 ntBASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Gm29171-201ENSMUST00000191397 486 ntBASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarca2Q6DIC0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Gm24844-201ENSMUST00000158679 127 ntBASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Gm3150-201ENSMUST00000166418 204 ntBASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Gm18367-201ENSMUST00000176139 600 ntBASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarca2Q6DIC0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Gm43807-201ENSMUST00000200678 1781 ntBASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Gm17877-201ENSMUST00000192578 814 ntBASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarca2Q6DIC0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Gm45643-201ENSMUST00000211364 1484 ntBASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Gm22920-201ENSMUST00000102175 109 ntBASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Gm9645-201ENSMUST00000197131 792 ntBASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 CT485606.1-201ENSMUST00000213187 878 ntBASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms