Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.01□□□□□ -0.01
Ctr9Q62018 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ctr9Q62018 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ctr9Q62018 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ctr9Q62018 Gm13875-201ENSMUST00000120162 282 ntBASIC15□□□□□ -0.01
Ctr9Q62018 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15□□□□□ -0.01
Ctr9Q62018 Gm7118-201ENSMUST00000200167 1003 ntBASIC15□□□□□ -0.01
Ctr9Q62018 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 Gm21769-201ENSMUST00000211922 111 ntBASIC15□□□□□ -0.01
Ctr9Q62018 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15□□□□□ -0.01
Ctr9Q62018 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15□□□□□ -0.01
Ctr9Q62018 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Ctr9Q62018 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15□□□□□ -0.01
Ctr9Q62018 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ctr9Q62018 Gm8617-201ENSMUST00000118796 2222 ntBASIC15□□□□□ -0.01
Ctr9Q62018 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ctr9Q62018 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ctr9Q62018 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.99□□□□□ -0.01
Ctr9Q62018 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.99□□□□□ -0.01
Ctr9Q62018 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ctr9Q62018 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Ctr9Q62018 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Gm11964-201ENSMUST00000120982 444 ntBASIC14.99□□□□□ -0.01
Ctr9Q62018 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.99□□□□□ -0.01
Ctr9Q62018 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
Ctr9Q62018 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ctr9Q62018 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ctr9Q62018 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ctr9Q62018 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ctr9Q62018 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ctr9Q62018 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ctr9Q62018 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.98□□□□□ -0.01
Ctr9Q62018 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Ctr9Q62018 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ctr9Q62018 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.98□□□□□ -0.01
Ctr9Q62018 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Ctr9Q62018 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.98□□□□□ -0.01
Ctr9Q62018 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ctr9Q62018 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.98□□□□□ -0.01
Ctr9Q62018 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.98□□□□□ -0.01
Ctr9Q62018 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.98□□□□□ -0.01
Ctr9Q62018 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ctr9Q62018 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.98□□□□□ -0.01
Ctr9Q62018 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms