Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.22■□□□□ 0.03
NfkbibQ60778 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.22■□□□□ 0.03
NfkbibQ60778 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.22■□□□□ 0.03
NfkbibQ60778 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.22■□□□□ 0.03
NfkbibQ60778 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Gm3096-201ENSMUST00000185770 364 ntBASIC15.22■□□□□ 0.03
NfkbibQ60778 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.22■□□□□ 0.03
NfkbibQ60778 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.22■□□□□ 0.03
NfkbibQ60778 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Gm6082-201ENSMUST00000215204 454 ntBASIC15.22■□□□□ 0.03
NfkbibQ60778 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.22■□□□□ 0.03
NfkbibQ60778 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.22■□□□□ 0.03
NfkbibQ60778 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
NfkbibQ60778 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.22■□□□□ 0.03
NfkbibQ60778 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NfkbibQ60778 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NfkbibQ60778 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.21■□□□□ 0.03
NfkbibQ60778 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NfkbibQ60778 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
NfkbibQ60778 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
NfkbibQ60778 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.21■□□□□ 0.03
NfkbibQ60778 Gm23119-201ENSMUST00000158610 140 ntBASIC15.21■□□□□ 0.03
NfkbibQ60778 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NfkbibQ60778 Gm13097-201ENSMUST00000210722 397 ntBASIC15.21■□□□□ 0.03
NfkbibQ60778 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NfkbibQ60778 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.21■□□□□ 0.03
NfkbibQ60778 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.21■□□□□ 0.03
NfkbibQ60778 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NfkbibQ60778 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NfkbibQ60778 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NfkbibQ60778 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.21■□□□□ 0.02
NfkbibQ60778 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
NfkbibQ60778 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NfkbibQ60778 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NfkbibQ60778 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
NfkbibQ60778 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NfkbibQ60778 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.21■□□□□ 0.02
NfkbibQ60778 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NfkbibQ60778 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NfkbibQ60778 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NfkbibQ60778 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NfkbibQ60778 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NfkbibQ60778 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NfkbibQ60778 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NfkbibQ60778 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NfkbibQ60778 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.2■□□□□ 0.02
NfkbibQ60778 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NfkbibQ60778 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NfkbibQ60778 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NfkbibQ60778 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NfkbibQ60778 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NfkbibQ60778 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NfkbibQ60778 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NfkbibQ60778 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.2■□□□□ 0.02
NfkbibQ60778 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NfkbibQ60778 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NfkbibQ60778 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.2■□□□□ 0.02
NfkbibQ60778 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NfkbibQ60778 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
NfkbibQ60778 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.2■□□□□ 0.02
NfkbibQ60778 Gm38317-201ENSMUST00000195564 343 ntBASIC15.2■□□□□ 0.02
NfkbibQ60778 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.2■□□□□ 0.02
NfkbibQ60778 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms