Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkl5Q3UTQ8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdkl5Q3UTQ8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Cdkl5Q3UTQ8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdkl5Q3UTQ8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdkl5Q3UTQ8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdkl5Q3UTQ8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdkl5Q3UTQ8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdkl5Q3UTQ8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdkl5Q3UTQ8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Gm15703-201ENSMUST00000120250 880 ntBASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Gm45784-201ENSMUST00000188360 142 ntBASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Gm38092-201ENSMUST00000195600 653 ntBASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdkl5Q3UTQ8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkl5Q3UTQ8 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdkl5Q3UTQ8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cdkl5Q3UTQ8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkl5Q3UTQ8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkl5Q3UTQ8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkl5Q3UTQ8 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkl5Q3UTQ8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cdkl5Q3UTQ8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkl5Q3UTQ8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkl5Q3UTQ8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cdkl5Q3UTQ8 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms