Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Mir8109-201ENSMUST00000184375 117 ntBASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Gm42627-201ENSMUST00000197347 224 ntBASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Mir1247-201ENSMUST00000116706 82 ntBASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Gm15703-201ENSMUST00000120250 880 ntBASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Gm29396-201ENSMUST00000185659 716 ntBASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nlrc4Q3UP24 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Mir1938-201ENSMUST00000158746 100 ntBASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Mospd4-201ENSMUST00000180618 576 ntBASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Gm27516-201ENSMUST00000184237 98 ntBASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Gm5904-201ENSMUST00000210286 865 ntBASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms