Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lrrk1Q3UHC2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lrrk1Q3UHC2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lrrk1Q3UHC2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lrrk1Q3UHC2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.71□□□□□ -0.53
Lrrk1Q3UHC2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrrk1Q3UHC2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gm11439-201ENSMUST00000118598 409 ntBASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gm3096-201ENSMUST00000185770 364 ntBASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gm44958-201ENSMUST00000203734 736 ntBASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gm21769-201ENSMUST00000211922 111 ntBASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Rmrp-201ENSMUST00000157463 271 ntBASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Gm16505-201ENSMUST00000179981 232 ntBASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Morn2-202ENSMUST00000227729 656 ntBASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrrk1Q3UHC2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Gm22902-201ENSMUST00000158488 302 ntBASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.69□□□□□ -0.54
Lrrk1Q3UHC2 Gm37489-201ENSMUST00000191883 159 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms