Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Gm12384-201ENSMUST00000119228 919 ntBASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Gm2231-201ENSMUST00000125661 612 ntBASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Gm17208-201ENSMUST00000168388 535 ntBASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cul4aQ3TCH7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Gm8810-201ENSMUST00000172895 754 ntBASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Gm27331-201ENSMUST00000183705 60 ntBASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cul4aQ3TCH7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms