Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cacna1aP97445 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cacna1aP97445 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cacna1aP97445 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cacna1aP97445 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.74□□□□□ -0.53
Cacna1aP97445 Gm6867-201ENSMUST00000219165 425 ntBASIC11.74□□□□□ -0.53
Cacna1aP97445 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.73□□□□□ -0.53
Cacna1aP97445 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cacna1aP97445 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cacna1aP97445 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.73□□□□□ -0.53
Cacna1aP97445 Gm23949-201ENSMUST00000104027 127 ntBASIC11.73□□□□□ -0.53
Cacna1aP97445 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cacna1aP97445 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.73□□□□□ -0.53
Cacna1aP97445 Gm28324-201ENSMUST00000187913 264 ntBASIC11.73□□□□□ -0.53
Cacna1aP97445 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.73□□□□□ -0.53
Cacna1aP97445 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.73□□□□□ -0.53
Cacna1aP97445 Gm18730-201ENSMUST00000218038 343 ntBASIC11.73□□□□□ -0.53
Cacna1aP97445 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.73□□□□□ -0.53
Cacna1aP97445 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cacna1aP97445 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cacna1aP97445 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cacna1aP97445 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.72□□□□□ -0.53
Cacna1aP97445 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.72□□□□□ -0.53
Cacna1aP97445 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.72□□□□□ -0.53
Cacna1aP97445 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.72□□□□□ -0.53
Cacna1aP97445 Gm19640-201ENSMUST00000214849 464 ntBASIC11.72□□□□□ -0.53
Cacna1aP97445 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.72□□□□□ -0.53
Cacna1aP97445 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Gm10312-201ENSMUST00000078515 489 ntBASIC11.72□□□□□ -0.53
Cacna1aP97445 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cacna1aP97445 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Cacna1aP97445 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.72□□□□□ -0.53
Cacna1aP97445 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Cacna1aP97445 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.72□□□□□ -0.53
Cacna1aP97445 Gm5904-201ENSMUST00000210286 865 ntBASIC11.72□□□□□ -0.53
Cacna1aP97445 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.72□□□□□ -0.53
Cacna1aP97445 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cacna1aP97445 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cacna1aP97445 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms