Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.91□□□□□ -0.18
Lig3P97386 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.91□□□□□ -0.18
Lig3P97386 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Lig3P97386 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.91□□□□□ -0.18
Lig3P97386 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.9□□□□□ -0.18
Lig3P97386 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.9□□□□□ -0.18
Lig3P97386 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.9□□□□□ -0.18
Lig3P97386 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.9□□□□□ -0.18
Lig3P97386 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Lig3P97386 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.9□□□□□ -0.18
Lig3P97386 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.9□□□□□ -0.18
Lig3P97386 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Lig3P97386 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.9□□□□□ -0.18
Lig3P97386 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.9□□□□□ -0.18
Lig3P97386 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.9□□□□□ -0.18
Lig3P97386 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.9□□□□□ -0.18
Lig3P97386 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.9□□□□□ -0.18
Lig3P97386 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.9□□□□□ -0.18
Lig3P97386 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.9□□□□□ -0.18
Lig3P97386 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Lig3P97386 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Lig3P97386 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig3P97386 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.9□□□□□ -0.19
Lig3P97386 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Lig3P97386 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Lig3P97386 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.9□□□□□ -0.19
Lig3P97386 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.89□□□□□ -0.19
Lig3P97386 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.89□□□□□ -0.19
Lig3P97386 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.89□□□□□ -0.19
Lig3P97386 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Mir698-201ENSMUST00000102164 109 ntBASIC13.89□□□□□ -0.19
Lig3P97386 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Gm14263-201ENSMUST00000117955 746 ntBASIC13.89□□□□□ -0.19
Lig3P97386 Gm13461-201ENSMUST00000120980 662 ntBASIC13.89□□□□□ -0.19
Lig3P97386 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.89□□□□□ -0.19
Lig3P97386 Mir6979-201ENSMUST00000183927 56 ntBASIC13.89□□□□□ -0.19
Lig3P97386 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Lig3P97386 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Lig3P97386 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Lig3P97386 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Lig3P97386 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Lig3P97386 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig3P97386 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms