Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.64□□□□□ -0.39
Ldb1P70662 Gm4768-201ENSMUST00000206199 686 ntBASIC12.64□□□□□ -0.39
Ldb1P70662 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.64□□□□□ -0.39
Ldb1P70662 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ldb1P70662 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ldb1P70662 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.64□□□□□ -0.39
Ldb1P70662 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ldb1P70662 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.64□□□□□ -0.39
Ldb1P70662 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ldb1P70662 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ldb1P70662 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.63□□□□□ -0.39
Ldb1P70662 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.63□□□□□ -0.39
Ldb1P70662 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ldb1P70662 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.63□□□□□ -0.39
Ldb1P70662 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.63□□□□□ -0.39
Ldb1P70662 Gm43818-201ENSMUST00000200605 466 ntBASIC12.63□□□□□ -0.39
Ldb1P70662 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.63□□□□□ -0.39
Ldb1P70662 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.63□□□□□ -0.39
Ldb1P70662 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ldb1P70662 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.63□□□□□ -0.39
Ldb1P70662 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.63□□□□□ -0.39
Ldb1P70662 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ldb1P70662 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ldb1P70662 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb1P70662 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.63□□□□□ -0.39
Ldb1P70662 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.62□□□□□ -0.39
Ldb1P70662 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ldb1P70662 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ldb1P70662 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Ldb1P70662 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.62□□□□□ -0.39
Ldb1P70662 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ldb1P70662 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.62□□□□□ -0.39
Ldb1P70662 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ldb1P70662 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Ldb1P70662 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.62□□□□□ -0.39
Ldb1P70662 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb1P70662 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms