Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smad1P70340 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smad1P70340 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smad1P70340 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smad1P70340 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smad1P70340 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smad1P70340 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smad1P70340 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smad1P70340 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smad1P70340 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.12□□□□□ -0.31
Smad1P70340 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smad1P70340 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smad1P70340 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Smad1P70340 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Gm15236-201ENSMUST00000117309 379 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Smad1P70340 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.11□□□□□ -0.31
Smad1P70340 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.11□□□□□ -0.31
Smad1P70340 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Gm27243-201ENSMUST00000183964 521 ntBASIC13.11□□□□□ -0.31
Smad1P70340 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Gm38241-201ENSMUST00000192641 898 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Gm19931-201ENSMUST00000198920 368 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Smad1P70340 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.11□□□□□ -0.31
Smad1P70340 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.11□□□□□ -0.31
Smad1P70340 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smad1P70340 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smad1P70340 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.1□□□□□ -0.31
Smad1P70340 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Smad1P70340 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Smad1P70340 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smad1P70340 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.1□□□□□ -0.31
Smad1P70340 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.1□□□□□ -0.31
Smad1P70340 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.1□□□□□ -0.31
Smad1P70340 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Gm19184-201ENSMUST00000196798 928 ntBASIC13.1□□□□□ -0.31
Smad1P70340 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.1□□□□□ -0.31
Smad1P70340 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.1□□□□□ -0.31
Smad1P70340 Gm18473-201ENSMUST00000220543 868 ntBASIC13.1□□□□□ -0.31
Smad1P70340 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Smad1P70340 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.1□□□□□ -0.31
Smad1P70340 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smad1P70340 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.1□□□□□ -0.31
Smad1P70340 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Smad1P70340 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.1□□□□□ -0.31
Smad1P70340 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.1□□□□□ -0.31
Smad1P70340 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smad1P70340 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Smad1P70340 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms