Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Sssca1P56873 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sssca1P56873 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.26□□□□□ -0.77
Sssca1P56873 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Sssca1P56873 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.26□□□□□ -0.77
Sssca1P56873 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.26□□□□□ -0.77
Sssca1P56873 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.26□□□□□ -0.77
Sssca1P56873 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.26□□□□□ -0.77
Sssca1P56873 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.26□□□□□ -0.77
Sssca1P56873 Itm2b-204ENSMUST00000228637 783 ntBASIC10.26□□□□□ -0.77
Sssca1P56873 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.26□□□□□ -0.77
Sssca1P56873 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.26□□□□□ -0.77
Sssca1P56873 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.26□□□□□ -0.77
Sssca1P56873 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Sssca1P56873 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.26□□□□□ -0.77
Sssca1P56873 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Sssca1P56873 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.25□□□□□ -0.77
Sssca1P56873 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sssca1P56873 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.25□□□□□ -0.77
Sssca1P56873 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Sssca1P56873 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.25□□□□□ -0.77
Sssca1P56873 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Gm12151-201ENSMUST00000121374 290 ntBASIC10.25□□□□□ -0.77
Sssca1P56873 Gm14719-201ENSMUST00000121891 340 ntBASIC10.25□□□□□ -0.77
Sssca1P56873 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sssca1P56873 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Sssca1P56873 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.25□□□□□ -0.77
Sssca1P56873 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.25□□□□□ -0.77
Sssca1P56873 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.25□□□□□ -0.77
Sssca1P56873 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.25□□□□□ -0.77
Sssca1P56873 Gm7730-201ENSMUST00000212486 454 ntBASIC10.25□□□□□ -0.77
Sssca1P56873 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.25□□□□□ -0.77
Sssca1P56873 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sssca1P56873 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sssca1P56873 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.25□□□□□ -0.77
Sssca1P56873 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.25□□□□□ -0.77
Sssca1P56873 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Sssca1P56873 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sssca1P56873 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sssca1P56873 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sssca1P56873 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms