Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Abcd3P55096 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.38□□□□□ -0.59
Abcd3P55096 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Abcd3P55096 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Abcd3P55096 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.38□□□□□ -0.59
Abcd3P55096 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Abcd3P55096 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.38□□□□□ -0.59
Abcd3P55096 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abcd3P55096 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Abcd3P55096 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.37□□□□□ -0.59
Abcd3P55096 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Abcd3P55096 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.37□□□□□ -0.59
Abcd3P55096 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Abcd3P55096 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Abcd3P55096 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.37□□□□□ -0.59
Abcd3P55096 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Abcd3P55096 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.37□□□□□ -0.59
Abcd3P55096 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.37□□□□□ -0.59
Abcd3P55096 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.37□□□□□ -0.59
Abcd3P55096 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.37□□□□□ -0.59
Abcd3P55096 Gm29649-201ENSMUST00000185649 419 ntBASIC11.37□□□□□ -0.59
Abcd3P55096 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.37□□□□□ -0.59
Abcd3P55096 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.37□□□□□ -0.59
Abcd3P55096 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Abcd3P55096 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.37□□□□□ -0.59
Abcd3P55096 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.37□□□□□ -0.59
Abcd3P55096 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Abcd3P55096 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Abcd3P55096 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.37□□□□□ -0.59
Abcd3P55096 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Abcd3P55096 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abcd3P55096 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Abcd3P55096 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Abcd3P55096 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Abcd3P55096 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Abcd3P55096 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Abcd3P55096 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Abcd3P55096 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Abcd3P55096 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.36□□□□□ -0.59
Abcd3P55096 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Abcd3P55096 Gm16296-201ENSMUST00000159905 325 ntBASIC11.36□□□□□ -0.59
Abcd3P55096 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.36□□□□□ -0.59
Abcd3P55096 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.36□□□□□ -0.59
Abcd3P55096 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.36□□□□□ -0.59
Abcd3P55096 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abcd3P55096 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms