Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacnb3P54285 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Cacnb3P54285 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacnb3P54285 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cacnb3P54285 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.77□□□□□ -0.05
Cacnb3P54285 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.77□□□□□ -0.05
Cacnb3P54285 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.77□□□□□ -0.05
Cacnb3P54285 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.77□□□□□ -0.05
Cacnb3P54285 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Gm43378-201ENSMUST00000199336 582 ntBASIC14.77□□□□□ -0.05
Cacnb3P54285 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Gm45118-201ENSMUST00000208928 825 ntBASIC14.77□□□□□ -0.05
Cacnb3P54285 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cacnb3P54285 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cacnb3P54285 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cacnb3P54285 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cacnb3P54285 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cacnb3P54285 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cacnb3P54285 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cacnb3P54285 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cacnb3P54285 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.77□□□□□ -0.05
Cacnb3P54285 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacnb3P54285 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cacnb3P54285 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.76□□□□□ -0.05
Cacnb3P54285 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Gm12314-201ENSMUST00000118104 538 ntBASIC14.76□□□□□ -0.05
Cacnb3P54285 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Mir1943-201ENSMUST00000158276 73 ntBASIC14.76□□□□□ -0.05
Cacnb3P54285 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.76□□□□□ -0.05
Cacnb3P54285 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.76□□□□□ -0.05
Cacnb3P54285 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacnb3P54285 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Cacnb3P54285 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.75□□□□□ -0.05
Cacnb3P54285 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.75□□□□□ -0.05
Cacnb3P54285 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Cacnb3P54285 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Cacnb3P54285 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Cacnb3P54285 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.75□□□□□ -0.05
Cacnb3P54285 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cacnb3P54285 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.75□□□□□ -0.05
Cacnb3P54285 Gm9555-201ENSMUST00000200908 583 ntBASIC14.75□□□□□ -0.05
Cacnb3P54285 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.75□□□□□ -0.05
Cacnb3P54285 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.75□□□□□ -0.05
Cacnb3P54285 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.75□□□□□ -0.05
Cacnb3P54285 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.75□□□□□ -0.05
Cacnb3P54285 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Cacnb3P54285 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cacnb3P54285 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Cacnb3P54285 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cacnb3P54285 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Cacnb3P54285 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.75□□□□□ -0.05
Cacnb3P54285 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacnb3P54285 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms