Protein–RNA interactions for Protein: P43024

Cox6a1, Cytochrome c oxidase subunit 6A1, mitochondrial, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cox6a1P43024 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.81□□□□□ -0.68
Cox6a1P43024 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cox6a1P43024 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.8□□□□□ -0.68
Cox6a1P43024 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.8□□□□□ -0.68
Cox6a1P43024 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Cox6a1P43024 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cox6a1P43024 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Cox6a1P43024 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cox6a1P43024 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Cox6a1P43024 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Gm44651-201ENSMUST00000207343 372 ntBASIC10.8□□□□□ -0.68
Cox6a1P43024 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.8□□□□□ -0.68
Cox6a1P43024 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Nsd1-205ENSMUST00000224693 852 ntBASIC10.8□□□□□ -0.68
Cox6a1P43024 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.8□□□□□ -0.68
Cox6a1P43024 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.8□□□□□ -0.68
Cox6a1P43024 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cox6a1P43024 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Gm10312-201ENSMUST00000078515 489 ntBASIC10.8□□□□□ -0.68
Cox6a1P43024 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.8□□□□□ -0.68
Cox6a1P43024 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.8□□□□□ -0.68
Cox6a1P43024 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.8□□□□□ -0.68
Cox6a1P43024 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.8□□□□□ -0.68
Cox6a1P43024 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.8□□□□□ -0.68
Cox6a1P43024 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cox6a1P43024 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.79□□□□□ -0.68
Cox6a1P43024 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.79□□□□□ -0.68
Cox6a1P43024 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cox6a1P43024 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cox6a1P43024 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Cox6a1P43024 Gm4909-201ENSMUST00000118749 794 ntBASIC10.79□□□□□ -0.68
Cox6a1P43024 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.79□□□□□ -0.68
Cox6a1P43024 Gm14999-201ENSMUST00000121039 624 ntBASIC10.79□□□□□ -0.68
Cox6a1P43024 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Gm25700-201ENSMUST00000177693 110 ntBASIC10.79□□□□□ -0.68
Cox6a1P43024 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cox6a1P43024 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.79□□□□□ -0.68
Cox6a1P43024 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.79□□□□□ -0.68
Cox6a1P43024 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.79□□□□□ -0.68
Cox6a1P43024 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.79□□□□□ -0.68
Cox6a1P43024 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cox6a1P43024 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Cox6a1P43024 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.79□□□□□ -0.68
Cox6a1P43024 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.79□□□□□ -0.68
Cox6a1P43024 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cox6a1P43024 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cox6a1P43024 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Cox6a1P43024 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cox6a1P43024 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Cox6a1P43024 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cox6a1P43024 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cox6a1P43024 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cox6a1P43024 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Cox6a1P43024 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cox6a1P43024 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms