Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hmx3P42581 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.66□□□□□ -0.7
Hmx3P42581 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hmx3P42581 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hmx3P42581 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Hmx3P42581 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.66□□□□□ -0.7
Hmx3P42581 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.66□□□□□ -0.7
Hmx3P42581 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Gm6912-201ENSMUST00000117218 544 ntBASIC10.66□□□□□ -0.7
Hmx3P42581 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.66□□□□□ -0.7
Hmx3P42581 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Hmx3P42581 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.66□□□□□ -0.7
Hmx3P42581 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.66□□□□□ -0.7
Hmx3P42581 Gm24420-201ENSMUST00000176676 59 ntBASIC10.66□□□□□ -0.7
Hmx3P42581 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Gm27989-201ENSMUST00000184721 107 ntBASIC10.66□□□□□ -0.7
Hmx3P42581 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.66□□□□□ -0.7
Hmx3P42581 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hmx3P42581 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.66□□□□□ -0.7
Hmx3P42581 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hmx3P42581 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hmx3P42581 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.66□□□□□ -0.7
Hmx3P42581 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Hmx3P42581 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.65□□□□□ -0.7
Hmx3P42581 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.65□□□□□ -0.7
Hmx3P42581 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.65□□□□□ -0.7
Hmx3P42581 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Hmx3P42581 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.65□□□□□ -0.7
Hmx3P42581 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.65□□□□□ -0.7
Hmx3P42581 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Hmx3P42581 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Hmx3P42581 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.65□□□□□ -0.7
Hmx3P42581 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Hmx3P42581 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.65□□□□□ -0.7
Hmx3P42581 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.65□□□□□ -0.7
Hmx3P42581 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.65□□□□□ -0.7
Hmx3P42581 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.65□□□□□ -0.7
Hmx3P42581 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.65□□□□□ -0.7
Hmx3P42581 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.65□□□□□ -0.7
Hmx3P42581 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmx3P42581 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms