Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Thbs1P35441 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.8□□□□□ -0.52
Thbs1P35441 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Thbs1P35441 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Thbs1P35441 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Thbs1P35441 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm13369-201ENSMUST00000119442 987 ntBASIC11.8□□□□□ -0.52
Thbs1P35441 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm17208-201ENSMUST00000168388 535 ntBASIC11.8□□□□□ -0.52
Thbs1P35441 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm8652-201ENSMUST00000181363 964 ntBASIC11.8□□□□□ -0.52
Thbs1P35441 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Thbs1P35441 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Thbs1P35441 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Thbs1P35441 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.8□□□□□ -0.52
Thbs1P35441 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.8□□□□□ -0.52
Thbs1P35441 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.8□□□□□ -0.52
Thbs1P35441 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Thbs1P35441 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.8□□□□□ -0.52
Thbs1P35441 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.8□□□□□ -0.52
Thbs1P35441 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Thbs1P35441 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Thbs1P35441 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Thbs1P35441 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Thbs1P35441 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.79□□□□□ -0.52
Thbs1P35441 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.79□□□□□ -0.52
Thbs1P35441 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Thbs1P35441 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.79□□□□□ -0.52
Thbs1P35441 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.79□□□□□ -0.52
Thbs1P35441 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.79□□□□□ -0.52
Thbs1P35441 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.79□□□□□ -0.52
Thbs1P35441 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Gm4271-201ENSMUST00000174444 973 ntBASIC11.79□□□□□ -0.52
Thbs1P35441 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.79□□□□□ -0.52
Thbs1P35441 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.79□□□□□ -0.52
Thbs1P35441 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.79□□□□□ -0.52
Thbs1P35441 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Gm10146-201ENSMUST00000072739 309 ntBASIC11.79□□□□□ -0.52
Thbs1P35441 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thbs1P35441 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms