Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Sftpa1P35242 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sftpa1P35242 Gm19353-201ENSMUST00000184561 445 ntBASIC11.73□□□□□ -0.53
Sftpa1P35242 Gm28882-201ENSMUST00000185504 314 ntBASIC11.73□□□□□ -0.53
Sftpa1P35242 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.73□□□□□ -0.53
Sftpa1P35242 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sftpa1P35242 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Gm44551-201ENSMUST00000208804 171 ntBASIC11.73□□□□□ -0.53
Sftpa1P35242 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.73□□□□□ -0.53
Sftpa1P35242 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.73□□□□□ -0.53
Sftpa1P35242 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.73□□□□□ -0.53
Sftpa1P35242 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sftpa1P35242 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sftpa1P35242 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sftpa1P35242 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.72□□□□□ -0.53
Sftpa1P35242 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sftpa1P35242 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Gm15432-201ENSMUST00000121106 195 ntBASIC11.72□□□□□ -0.53
Sftpa1P35242 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.72□□□□□ -0.53
Sftpa1P35242 Gm16296-201ENSMUST00000159905 325 ntBASIC11.72□□□□□ -0.53
Sftpa1P35242 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.72□□□□□ -0.53
Sftpa1P35242 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.72□□□□□ -0.53
Sftpa1P35242 Gm5369-201ENSMUST00000217499 588 ntBASIC11.72□□□□□ -0.53
Sftpa1P35242 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Sftpa1P35242 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sftpa1P35242 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sftpa1P35242 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sftpa1P35242 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sftpa1P35242 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Sftpa1P35242 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
Sftpa1P35242 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sftpa1P35242 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sftpa1P35242 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sftpa1P35242 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sftpa1P35242 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sftpa1P35242 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sftpa1P35242 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sftpa1P35242 Gm23949-201ENSMUST00000104027 127 ntBASIC11.71□□□□□ -0.53
Sftpa1P35242 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sftpa1P35242 Gm15515-201ENSMUST00000117827 822 ntBASIC11.71□□□□□ -0.53
Sftpa1P35242 Gm11450-201ENSMUST00000121144 333 ntBASIC11.71□□□□□ -0.53
Sftpa1P35242 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.71□□□□□ -0.53
Sftpa1P35242 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.71□□□□□ -0.53
Sftpa1P35242 Gm10051-201ENSMUST00000145209 414 ntBASIC11.71□□□□□ -0.53
Sftpa1P35242 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.71□□□□□ -0.53
Sftpa1P35242 Mir7221-201ENSMUST00000184009 72 ntBASIC11.71□□□□□ -0.53
Sftpa1P35242 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.71□□□□□ -0.53
Sftpa1P35242 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sftpa1P35242 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.71□□□□□ -0.53
Sftpa1P35242 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.71□□□□□ -0.53
Sftpa1P35242 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Sftpa1P35242 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.71□□□□□ -0.53
Sftpa1P35242 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.71□□□□□ -0.53
Sftpa1P35242 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.71□□□□□ -0.53
Sftpa1P35242 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms